STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_06523Helicase C-terminal domain-containing protein. (2343 aa)    
Predicted Functional Partners:
PIIN_04103
Related to probable RNA helicase MPH1.
    
 0.839
PIIN_03773
Related to UVS-2 DNA repair protein UVS-2.
    
 0.823
PIIN_03426
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 0.819
PIIN_00528
Probable ARP5-Actin-related protein; Belongs to the actin family.
    
 0.818
PIIN_01285
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
    
 0.816
PIIN_09538
Probable Rpo26-18kD subunit of DNA-directed RNA polymerases I, II, III.
    
 0.811
PIIN_01265
Related to ITC1-subunit of Isw2 chromatin remodelling complex.
   
 0.804
PIIN_05601
Probable MMS2-part of the error-free postreplication repair pathway.
    
 0.785
PIIN_04087
Probable Chromatin assembly factor 1 subunit c.
    
 0.784
PIIN_01403
Related to RPB3-DNA-directed RNA polymerase II chain.
    
 0.748
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.