STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_06555Related to PHD finger protein. (982 aa)    
Predicted Functional Partners:
PIIN_01468
Uncharacterized protein.
    
 0.923
PIIN_02179
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.849
PIIN_02748
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.849
PIIN_08067
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.849
PIIN_00616
Chromatin modification-related protein.
    
 0.789
PIIN_01937
Related to 6-hydroxy-D-nicotine oxidase; Belongs to the oxygen-dependent FAD-linked oxidoreductase family.
    
 0.789
PIIN_02305
Chromatin modification-related protein.
    
 0.789
PIIN_03857
Chromatin modification-related protein.
    
 0.789
PIIN_07921
F-box domain-containing protein.
    
 0.789
PIIN_04212
Uncharacterized protein.
   
 
  0.582
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.