STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_06560Uncharacterized protein. (434 aa)    
Predicted Functional Partners:
PIIN_02378
Probable YEF3-translation elongation factor eEF3.
   
 
 0.898
PIIN_03909
Related to 80 kDa nuclear cap binding protein.
   
 0.886
PIIN_01112
Related to TIF2-translation initiation factor eIF4A.
   
 0.873
PIIN_04876
Probable TIF2-translation initiation factor eIF4A.
   
 0.873
PIIN_01170
Related to protein mediates microtubule-dependent mRNA transport.
   
 0.871
PIIN_00698
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 0.871
PIIN_04626
Uncharacterized protein.
   
 0.868
PIIN_00517
Related to translation initiation factor eIF-4E; Belongs to the eukaryotic initiation factor 4E family.
   
 0.868
PIIN_01157
Probable translation initiation factor eIF-2 alpha chain.
   
 0.855
TIF35
Eukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA.
   
 0.839
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.