STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_06569Related to STE6-ABC transporter. (1515 aa)    
Predicted Functional Partners:
PIIN_03578
Polysacc_synt_4 domain-containing protein.
 
      0.651
PIIN_00318
Probable ATP-binding cassette transporter protein, mitochondrial.
    
0.608
PIIN_07528
Related to ABC transporter ATP-binding protein-Robiginitalea biformata.
    
0.605
PIIN_02249
Related to cytoskeleton assembly control protein.
    
 0.602
PIIN_08509
Probable clathrin-associated adaptor complex medium chain; Belongs to the adaptor complexes medium subunit family.
    
  0.601
PIIN_02135
Ubiquitin carboxyl-terminal hydrolase.
    
  0.592
PIIN_09798
Probable Leptomycin B resistance protein pmd1.
  
  
 
0.592
PIIN_02380
Probable ATP-binding cassette (ABC) transporter.
   
 
0.591
PIIN_05460
RING-type domain-containing protein.
    
  0.563
PIIN_01309
ENTH domain-containing protein.
    
 0.556
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.