STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_06614Rhomboid domain-containing protein. (421 aa)    
Predicted Functional Partners:
PIIN_01736
Related to AAA protease IAP-1 (Mitochondrial intermembrane space).
   
 
 0.809
PIIN_06017
Prohibitin.
   
 0.795
PIIN_01563
Uncharacterized protein.
   
 0.711
PIIN_03071
Prohibitin.
   
 0.684
PIIN_07484
Probable AFG3-protease of the SEC18/CDC48/PAS1 family of ATPases (AAA).
   
 
 0.661
PIIN_08981
Related to stomatin.
   
 0.638
PIIN_06303
Related to GTP-binding protein FZO1, required for biogenesis of mitochondria; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
   
 
 0.617
PIIN_02499
Peroxidase; Belongs to the peroxidase family.
   
 
 0.543
PIIN_05299
Probable MAS6-mitochondrial inner membrane import translocase subunit.
   
 
 0.498
PIIN_04335
5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
  
    0.493
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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