STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_06615Related to DCR2-dosage-dependent cell cycle regulator. (664 aa)    
Predicted Functional Partners:
PIIN_04362
AB hydrolase-1 domain-containing protein.
    
 0.825
PIIN_05686
Related to epoxide hydrolase.
    
 0.825
PIIN_05744
Probable PHO81-cyclin-dependent kinase inhibitor.
  
 0.809
PIIN_03035
annotation not available
    
 0.783
PIIN_07489
Probable LTP1-protein-tyrosine-phosphatase.
    
 0.758
PIIN_00088
Related to CR-1 adenylate cyclase (ATP pyrophosphate-lyase) CR-1.
     
 0.753
PIIN_10211
SET domain-containing protein.
     
 0.707
PIIN_01070
Related to FMN1-Riboflavin kinase.
    
 0.682
PIIN_02670
Probable APT1-adenine phosphoribosyltransferase.
  
 
 0.647
PIIN_04423
Protein-S-isoprenylcysteine O-methyltransferase; Belongs to the class VI-like SAM-binding methyltransferase superfamily. Isoprenylcysteine carboxyl methyltransferase family.
    
  0.637
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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