STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_06701Related to allantoate permease. (503 aa)    
Predicted Functional Partners:
PIIN_02117
Glyceraldehyde-3-phosphate dehydrogenase.
    
 0.573
PIIN_09361
Related to SIS2 protein (Cycle-specific gene control).
     
 0.505
PIIN_01672
Probable phosphoglyceromutase.
     
 0.491
PIIN_05073
Related to RNA14-component of pre-mRNA 3`-end processing factor CF I.
     
 0.491
PIIN_01862
Related to L-lactate dehydrogenase (Cytochrome b2).
   
 0.427
PIIN_04410
Related to L-lactate dehydrogenase (Cytochrome b2).
   
 0.427
PIIN_06209
Probable CYB2-L-lactate dehydrogenase (Cytochrome b2); Belongs to the cytochrome b5 family.
   
 0.427
PIIN_02749
UBX domain-containing protein.
    
  0.426
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.