STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_06746Uncharacterized protein. (843 aa)    
Predicted Functional Partners:
PIIN_08611
Related to MAK3 N-acetyltransferase.
   
 0.996
PIIN_02471
Sm domain-containing protein.
    
 0.992
PIIN_03422
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.962
PIIN_08478
Related to small nuclear ribonucleoprotein associated protein b.
    
 0.944
PIIN_04613
Probable N-terminal acetyltransferase complex subunit ARD1.
    
 0.719
PIIN_04002
Related to actin cytoskeleton organization protein-Laccaria bicolor.
   
  
 0.571
PIIN_00481
Related to n-terminal acetyltransferase 1.
   
  
 0.516
PIIN_00374
Probable N-acetyltransferase 5.
      
 0.509
PIIN_08188
annotation not available
     
 0.505
PIIN_10184
Uncharacterized protein.
   
    0.440
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.