STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_06811Related to MTR10-involved in nuclear protein import. (1049 aa)    
Predicted Functional Partners:
PIIN_00573
Probable ubiquitin--protein ligase hus5; Belongs to the ubiquitin-conjugating enzyme family.
   
 
 0.956
PIIN_04914
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
 
 0.938
PIIN_06397
Related to Y14, exon junction complex.
    
 
 0.935
PIIN_03817
Probable mago nashi protein, exon junction complex.
    
 
 0.933
PIIN_05529
WLM domain-containing protein.
   
 
 0.915
PIIN_04890
Probable eukaryotic translation initiation factor 1a; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.
    
 
 0.908
PIIN_01886
Probable bifunctional purine biosynthetic protein ade1.
   
 0.902
PIIN_08384
Related to glycinamide ribonucleotide transformylase.
   
 0.902
PIIN_00133
Eukaryotic translation initiation factor 5A.
    
 
 0.815
PIIN_00035
Probable phosphoribosylformyl glycinamidine synthetase.
     
  0.581
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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