STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_06871Related to Iron transport protein 1. (637 aa)    
Predicted Functional Partners:
PIIN_05388
Related to cytochrome b-type NAD(P)H oxidoreductase; Belongs to the cytochrome b5 family.
   
 0.713
PIIN_05011
DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.
 
      0.707
PIIN_03023
Related to RAV1-Regulator of (H+)-ATPase in vacuolar membrane.
 
      0.671
PIIN_08738
Probable stress-induced protein STI1.
    
  0.599
PIIN_05263
MOSC domain-containing protein.
   
 
 0.595
PIIN_01248
Uncharacterized protein.
   
 0.587
PIIN_01361
Related to MCR1-cytochrome-b5 reductase.
   
 0.587
PIIN_02055
NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
   
 0.587
PIIN_07363
Uncharacterized protein.
   
 0.587
PIIN_11428
NAD_binding_1 domain-containing protein.
   
 0.587
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.