STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_06913Related to GLE2-required for nuclear pore complex structure and function. (334 aa)    
Predicted Functional Partners:
PIIN_07538
Related to spindle assembly checkpoint protein.
   
 0.999
PIIN_07721
Uncharacterized protein.
    
 0.994
PIIN_03067
ANAPC4 domain-containing protein.
    
 0.988
PIIN_04122
Related to cell cycle protein p55cdc.
   
 0.980
PIIN_06011
Uncharacterized protein.
   
 
 0.978
PIIN_04654
Probable FZR protein (Fizzy-related protein).
   
 0.967
PIIN_00848
Probable MAD2-spindle-assembly checkpoint protein.
   
 0.966
PIIN_07274
HORMA domain-containing protein.
   
 0.966
PIIN_05713
Related to zinc finger protein.
   
 
 0.963
PIIN_02051
Spc7 domain-containing protein.
    
 0.961
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.