STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_07066DUF1713 domain-containing protein. (343 aa)    
Predicted Functional Partners:
PIIN_11679
Uncharacterized protein.
    
 0.959
PIIN_02061
Uncharacterized protein.
    
 0.927
PIIN_11834
C-CAP/cofactor C-like domain-containing protein.
    
 0.916
PIIN_03630
Uncharacterized protein.
    
 0.916
PIIN_03801
Uncharacterized protein.
   
 0.852
PIIN_00503
Uncharacterized protein.
   
 0.852
PIIN_08188
annotation not available
   
 0.818
PIIN_08484
Uncharacterized protein.
   
 0.818
PIIN_03822
Related to ERP2-p24 protein involved in membrane trafficking.
   
  0.807
PIIN_01225
Related to GTPase-activating protein of the rho/rac family (LRG1 protein).
    
 0.781
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.