STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_07078Uncharacterized protein. (407 aa)    
Predicted Functional Partners:
PIIN_02564
Related to Sel-1 homolog.
   
 0.832
PIIN_03127
PRKCSH domain-containing protein.
    
 0.830
PIIN_01012
Related to HRD1-involved in degradation of Hmg2p.
   
 0.829
PIIN_04051
Probable CDC48-Microsomal protein of CDC48/PAS1/SEC18 family of ATPases; Belongs to the AAA ATPase family.
   
 0.778
PIIN_04750
Related to AFG2-ATPase of the CDC48/PAS1/SEC18 (AAA) family.
   
 0.778
PIIN_03453
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 0.775
PIIN_09356
Uncharacterized protein.
    
 0.747
PIIN_01963
Related to TOB3 (Member of AAA-ATPase family).
   
 0.711
PIIN_08093
Related to TRX2-thioredoxin II.
   
 0.686
PIIN_05460
RING-type domain-containing protein.
    
 0.657
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.