STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_07098Related to cellulose binding protein CEL1. (229 aa)    
Predicted Functional Partners:
PIIN_06011
Uncharacterized protein.
   
 0.983
PIIN_09003
Related to proteophosphoglycan 5-Leishmania major strain Friedlin.
   
 0.911
PIIN_06102
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.909
PIIN_00882
Related to mRNA export factor mex67.
   
 0.902
PIIN_06723
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.860
PIIN_07234
Nuclear pore protein.
   
 0.851
PIIN_06131
Uncharacterized protein.
   
 0.845
PIIN_00478
Related to nuclear pore protein; Belongs to the WD repeat SEC13 family.
    
 0.838
PIIN_05209
Related to NUP170-nuclear pore protein.
   
 0.824
PIIN_01203
Uncharacterized protein.
   
 0.818
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.