STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_07120Related to ribosomal protein S13; Belongs to the universal ribosomal protein uS13 family. (188 aa)    
Predicted Functional Partners:
PIIN_06677
Probable ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.
  
 0.992
PIIN_01134
Related to MRPS5-mitochondrial ribosomal protein, small subunit; Belongs to the universal ribosomal protein uS5 family.
  
 0.991
PIIN_11735
Related to MRP2-mitochondrial ribosomal protein, small subunit.
  
 0.991
PIIN_00452
Probable ribosomal protein S12, cytosolic; Belongs to the universal ribosomal protein uS19 family.
  
 0.990
PIIN_00972
Probable mrna export factor elf1.
   
 
 0.990
PIIN_01364
Related to MRPS28-mitochondrial ribosomal protein, small subunit.
   
 0.990
PIIN_02378
Probable YEF3-translation elongation factor eEF3.
   
 
 0.990
PIIN_02428
Probable 40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.
  
 0.990
PIIN_02502
Probable ribosomal protein S28; Belongs to the universal ribosomal protein uS12 family.
  
 0.990
PIIN_03053
Related to RSM7-mitochondrial ribosomal protein, small subunit.
  
 0.990
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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