STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_07136Protein kinase domain-containing protein. (162 aa)    
Predicted Functional Partners:
PIIN_01866
AMPK1_CBM domain-containing protein.
    
 0.806
PIIN_05342
AMPKBI domain-containing protein.
    
 0.806
PIIN_05068
Probable nuclear protein SNF4.
   
 0.723
PIIN_07509
C3H1-type domain-containing protein.
   
 0.723
PIIN_07510
Uncharacterized protein.
   
 0.723
PIIN_08840
Probable nuclear protein SNF4.
   
 0.723
PIIN_08460
Related to KOG1-Subunit of TORC1, a rapamycin-sensitive complex involved in growth control.
    
 0.716
PIIN_01808
Probable CDC31-spindle pole body component, centrin.
    
 0.690
PIIN_00640
Uncharacterized protein.
   
 0.679
PIIN_05687
Probable CNB1-calcineurin B, regulatory subunit.
   
 0.655
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.