STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_07226Related to tetraspanin Pls1 family-Laccaria bicolor. (216 aa)    
Predicted Functional Partners:
PIIN_01774
Protein kinase domain-containing protein.
    
 0.883
PIIN_04572
Uncharacterized protein.
    
 0.732
PIIN_03186
Uncharacterized protein.
  
 
 0.724
PIIN_05945
Related to peroxidase DyP.
    
 0.710
PIIN_05946
Related to peroxidase DyP.
    
 0.710
PIIN_03459
Uncharacterized protein.
  
 
 0.708
PIIN_01026
Related to GCC2 and GCC3 family protein-Laccaria bicolor.
    
 0.661
PIIN_02342
Probable KEX2-endoproteinase of late golgi compartment.
     
 0.661
PIIN_02334
Probable KEX2-endoproteinase of late golgi compartment.
     
 0.661
PIIN_04826
Uncharacterized protein.
    
 0.650
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.