STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_07230Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family. (636 aa)    
Predicted Functional Partners:
PIIN_00078
Uncharacterized protein.
   
 0.999
PIIN_00442
Uncharacterized protein.
    
 0.999
PIIN_03147
Related to signal recognition particle 9 protein (SRP9).
   
 0.999
PIIN_08988
Uncharacterized protein.
    
 0.999
PIIN_03442
Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.
    
 0.999
PIIN_01018
Related to SRP101-signal recognition particle receptor, alpha chain.
   
 0.971
PIIN_07340
Uncharacterized protein.
   
 
 0.951
PIIN_01749
Probable RPL3-60s ribosomal protein l3; Belongs to the universal ribosomal protein uL3 family.
    
 
 0.932
PIIN_09589
Probable RPL25-ribosomal protein L23a.e; Belongs to the universal ribosomal protein uL23 family.
   
 
 0.927
PIIN_04956
60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family.
    
   0.921
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.