STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_07285Related to NCR1-transmembrane glycoprotein, involved in sphingolipid metabolism. (1399 aa)    
Predicted Functional Partners:
PIIN_00526
BHLH domain-containing protein.
   
 0.960
PIIN_02194
Uncharacterized protein.
   
 0.730
PIIN_07714
Uncharacterized protein.
   
 0.730
PIIN_07853
Related to putative oxysterol-binding protein OSBP; Belongs to the OSBP family.
   
 0.677
PIIN_05122
Related to putative oxysterol-binding protein OSBP.
   
 0.666
PIIN_06805
Related to KES1-Member of an oxysterol-binding protein family; Belongs to the OSBP family.
   
 0.666
PIIN_00834
RRM domain-containing protein.
 
      0.592
PIIN_08445
Related to phosphatidylglycerol/phosphatidylinositol transfer protein.
    
 
 0.438
PIIN_04233
Related to ABC transporter protein.
  
 
 0.429
PIIN_03058
Related to OSH3-Member of oxysterol-binding protein family.
    
 
 0.409
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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