STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_07307Related to C.elegans ZK688.3 protein and E.coli hpcEp. (238 aa)    
Predicted Functional Partners:
PIIN_01683
Probable FUM1-fumarate hydratase.
   
 0.850
PIIN_05897
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
  
 
  0.812
PIIN_02942
3-isopropylmalate dehydratase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
  
 
  0.800
PIIN_00892
Related to SDH3-cytochrome b560 subunit of respiratory complex II.
   
 
  0.791
PIIN_00314
Probable malate synthase, glyoxisomal.
  
 
 0.772
PIIN_11755
Probable aldehyde dehydrogenase family 7 member A1; Belongs to the aldehyde dehydrogenase family.
   
 0.764
PIIN_00376
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.701
PIIN_02141
Related to aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.701
PIIN_02674
Probable aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.701
PIIN_02936
Probable delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.701
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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