STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_07467Probable YOR1-ABC transporter. (871 aa)    
Predicted Functional Partners:
PIIN_01526
Probable YOR1-ABC transporter.
 
  
  0.956
PIIN_11197
Related to YBT1-Vacuolar, full-size ABC protein transporting bile acids.
 
     0.919
PIIN_09208
Related to multidrug resistance protein.
 
      0.834
PIIN_11897
Related to multidrug resistance protein.
 
      0.724
PIIN_02135
Ubiquitin carboxyl-terminal hydrolase.
    
  0.670
PIIN_03453
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
  0.635
PIIN_05460
RING-type domain-containing protein.
    
 0.633
PIIN_02240
Probable ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.625
PIIN_00463
annotation not available
  
  
 
0.614
PIIN_08509
Probable clathrin-associated adaptor complex medium chain; Belongs to the adaptor complexes medium subunit family.
    
  0.610
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.