STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_07496Related to meiotic recombination protein rec8. (493 aa)    
Predicted Functional Partners:
PIIN_01164
Structural maintenance of chromosomes protein.
   
 0.981
PIIN_07812
Related to Nuclear cohesin complex subunit.
   
 0.975
PIIN_11740
Related to PDS5-precocious dissociation of sister chromatids.
   
 0.958
PIIN_00159
Related to Separin.
   
 0.949
PIIN_00944
Related to DNA polymerase eta.
   
 0.938
PIIN_06852
Structural maintenance of chromosomes protein.
   
 0.937
PIIN_07709
Sister chromatid cohesion protein.
   
 0.932
PIIN_11050
Probable SMC1-chromosome segregation protein.
   
 0.905
PIIN_07738
Related to CDC5-Serine/threonine-protein kinase.
   
 0.890
PIIN_04174
SMC_N domain-containing protein.
   
 0.874
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.