STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_07797Related to cytochrome P450 7B1; Belongs to the cytochrome P450 family. (525 aa)    
Predicted Functional Partners:
PIIN_00403
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
   
 0.875
PIIN_01979
Related to C-4 methyl sterol oxidase; Belongs to the sterol desaturase family.
   
 0.856
PIIN_03807
Probable ERG25-C-4 methyl sterol oxidase; Belongs to the sterol desaturase family.
   
 0.856
PIIN_08821
Related to ERG26-C-3 sterol dehydrogenase (C-4 decarboxylase).
   
 0.770
PIIN_05827
Related to ERG28-involved in synthesis of ergosterol.
   
 
 0.727
PIIN_05353
Related to squalene monooxygenase.
   
 0.726
PIIN_09724
Related to ERG27-3-keto sterol reductase.
   
 
 0.726
PIIN_03431
Probable sterol delta 5,6-desaturase; Belongs to the sterol desaturase family.
   
 0.717
PIIN_01133
Related to vacuolar protein sorting-associated protein VPS5.
   
 0.713
PIIN_07673
Uncharacterized protein.
   
 0.713
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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