STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_08301Probable Chitin deacetylase. (516 aa)    
Predicted Functional Partners:
PIIN_01774
Protein kinase domain-containing protein.
    
 0.920
PIIN_01026
Related to GCC2 and GCC3 family protein-Laccaria bicolor.
    
 0.689
PIIN_07813
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
    
 0.645
PIIN_07226
Related to tetraspanin Pls1 family-Laccaria bicolor.
    
 0.596
PIIN_08509
Probable clathrin-associated adaptor complex medium chain; Belongs to the adaptor complexes medium subunit family.
    
  0.594
PIIN_03186
Uncharacterized protein.
    
 0.574
PIIN_03459
Uncharacterized protein.
    
 0.574
PIIN_04598
Related to Vacuolar membrane protein.
    
 0.574
PIIN_05854
Protein kinase domain-containing protein.
    
 0.574
PIIN_01286
D-ser_dehydrat domain-containing protein.
    
 0.569
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.