STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_08336HTH_33 domain-containing protein. (218 aa)    
Predicted Functional Partners:
PIIN_02796
Related to Tim22, mitochondrial import inner membrane translocase subunit.
    
 0.880
PIIN_04459
Succinate dehydrogenase [ubiquinone] cytochrome b small subunit.
    
 0.824
PIIN_00516
zf-Tim10_DDP domain-containing protein.
   
 0.788
PIIN_00575
Related to LCB5-sphingolipid long chain base kinase.
    
 0.604
PIIN_04158
DAGKc domain-containing protein.
    
 0.604
PIIN_04582
PAS domain-containing protein.
     
 0.600
PIIN_08559
BHLH domain-containing protein.
     
 0.600
PIIN_04212
Uncharacterized protein.
    
  0.482
PIIN_00892
Related to SDH3-cytochrome b560 subunit of respiratory complex II.
    
 
 0.481
PIIN_06801
Related to homeodomain transcription factor-Laccaria bicolor.
   
 0.435
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.