STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_08372Uncharacterized protein. (865 aa)    
Predicted Functional Partners:
PIIN_07554
Related to rat ubiquitin ligase Nedd4.
   
 
 0.769
PIIN_03140
AN1-type domain-containing protein.
   
 0.745
PIIN_03333
Related to UBI4-Ubiquitin.
   
 0.745
PIIN_04265
Related to UBI4-Ubiquitin.
   
 0.745
PIIN_02378
Probable YEF3-translation elongation factor eEF3.
   
   0.668
PIIN_00862
Related to proteophosphoglycan ppg4-Leishmania braziliensis.
    
 0.656
PIIN_00853
Uncharacterized protein.
    
 0.656
PIIN_01523
Probable RPL40A-Ubiquitin.
    
 0.656
PIIN_08776
Uncharacterized protein.
    
 0.656
PIIN_04681
Probable ubiquitin/ribosomal protein S27a fusion protein.
   
 0.650
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.