STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_08467Related to NAD(P)H-dependent oxidoreductase. (312 aa)    
Predicted Functional Partners:
PIIN_09107
Probable YAH1-Ferredoxin of the mitochondrial matrix.
   
 0.666
PIIN_01871
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
    
  0.600
PIIN_02374
FSH1 domain-containing protein.
   
 
 0.597
PIIN_08189
Related to short-chain alcohol dehydrogenase.
  
 0.588
PIIN_03889
Very-long-chain 3-oxoacyl-CoA reductase; Component of the microsomal membrane bound fatty acid elongation system, which produces the 26-carbon very long-chain fatty acids (VLCFA) from palmitate. Catalyzes the reduction of the 3- ketoacyl-CoA intermediate that is formed in each cycle of fatty acid elongation. VLCFAs serve as precursors for ceramide and sphingolipids.
  
 0.568
PIIN_00025
Uncharacterized protein.
   
 0.566
PIIN_00412
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.562
PIIN_03999
Related to formaldehyde dehydrogenase.
   
 
 0.542
PIIN_04933
Uncharacterized protein.
   
 
 0.542
PIIN_00668
RING-type domain-containing protein.
     
 0.542
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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