STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_08606Probable MRS4-Protein of the mitochondrial carrier family (MCF); Belongs to the mitochondrial carrier (TC 2.A.29) family. (309 aa)    
Predicted Functional Partners:
PIIN_04298
Related to SLM5-Asparaginyl-tRNA synthetase, mitochondrial.
 
   
  0.934
TRM8
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
 
 
    0.892
PIIN_02325
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
 
      0.817
PIIN_04825
Probable DED81-asparaginyl-tRNA-synthetase.
 
   
  0.790
PIIN_11031
Related to regulator of mitochondrial iron homeostasis.
    
 
 0.742
PIIN_00537
Uncharacterized protein.
 
      0.724
PIIN_02276
Related to ECM32-DNA dependent ATPase/DNA helicase B.
 
      0.644
PIIN_09813
Related to CCC1 protein (Involved in calcium homeostasis).
    
 
 0.592
PIIN_00318
Probable ATP-binding cassette transporter protein, mitochondrial.
    
 
 0.569
PIIN_00381
Related to XPT1-xanthine phosphoribosyl transferase.
 
 
    0.513
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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