STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_08610WD_REPEATS_REGION domain-containing protein. (363 aa)    
Predicted Functional Partners:
PIIN_05558
Probable GTP-binding protein Rab11.
    
 0.713
PIIN_07738
Related to CDC5-Serine/threonine-protein kinase.
    
 0.620
PIIN_10019
POLO box domain-containing protein.
    
 0.620
PIIN_11320
Uncharacterized protein.
    
 0.620
PIIN_11643
POLO box domain-containing protein.
    
 0.620
PIIN_08789
Uncharacterized protein.
     
 0.574
PIIN_07489
Probable LTP1-protein-tyrosine-phosphatase.
     
 0.513
PIIN_00088
Related to CR-1 adenylate cyclase (ATP pyrophosphate-lyase) CR-1.
    
 0.502
PIIN_03504
Probable NADH-ubiquinone oxidoreductase.
   
 
  0.486
PIIN_06996
Related to nucleotide diphosphatase.
     
 0.472
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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