STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_08612Related to rat omega-conotoxin-sensitive calcium channel alpha-1 subunit rbB-I. (2111 aa)    
Predicted Functional Partners:
PIIN_05589
AP-1 complex subunit gamma.
   
 
 0.798
PIIN_06409
Adaptin_N domain-containing protein.
   
 
 0.681
PIIN_03547
Probable clathrin assembly protein AP47; Belongs to the adaptor complexes medium subunit family.
    
 
 0.642
PIIN_02578
AP-3 complex subunit delta; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane.
   
 
 0.594
PIIN_00854
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
   0.586
PIIN_07423
Related to GGA2-Arf-binding protein.
  
 
   0.420
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.