STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_08620Uncharacterized protein. (571 aa)    
Predicted Functional Partners:
PIIN_04087
Probable Chromatin assembly factor 1 subunit c.
    
 0.683
PIIN_02683
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.655
PIIN_03470
Related to histone deacetylase.
    
 0.655
PIIN_04004
Probable HOS2-putative histone deacetylase.
    
 0.655
PIIN_06656
Related to histone deacetylase.
    
 0.655
PIIN_03350
Related to SFH1 subunit of the RSC complex.
   
 
 0.641
PIIN_04338
Related to HOS3-Trichostatin A-insensitive homodimeric histone deacetylase (HDAC).
    
 0.592
PIIN_04549
Related to histone deacetylase superfamily-Chloroflexus aggregans DSM 9485.
    
 0.592
PIIN_06687
Related to HDA1-histone deacetylase A.
    
 0.592
PIIN_06496
Uncharacterized protein.
     
 0.589
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
Server load: low (16%) [HD]