STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_08673Related to ALO1-D-arabinono-1,4-lactone oxidase. (621 aa)    
Predicted Functional Partners:
PIIN_01862
Related to L-lactate dehydrogenase (Cytochrome b2).
   
 0.902
PIIN_04410
Related to L-lactate dehydrogenase (Cytochrome b2).
   
 0.837
PIIN_06209
Probable CYB2-L-lactate dehydrogenase (Cytochrome b2); Belongs to the cytochrome b5 family.
   
 0.837
PIIN_05388
Related to cytochrome b-type NAD(P)H oxidoreductase; Belongs to the cytochrome b5 family.
   
 0.731
PIIN_04362
AB hydrolase-1 domain-containing protein.
    
 0.723
PIIN_05686
Related to epoxide hydrolase.
    
 0.723
PIIN_05680
Related to Weak similarity to Pseudomonas L-fucose dehydrogenase.
     
 0.702
PIIN_05897
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
    
 0.693
PIIN_00314
Probable malate synthase, glyoxisomal.
  
 
 0.668
PIIN_08763
Probable electron transfer flavoprotein alpha chain.
  
 
 0.658
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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