STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_08771Uncharacterized protein. (351 aa)    
Predicted Functional Partners:
PIIN_04633
Related to c-terminal kinesin; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.829
PIIN_00600
Uncharacterized protein.
    
 0.791
PIIN_03527
Uncharacterized protein.
    
 0.777
PIIN_00495
Uncharacterized protein.
    
 0.777
PIIN_01643
Probable SCF complex member Cullin 1; Belongs to the cullin family.
    
 0.737
PIIN_07301
Related to Cullin-3; Belongs to the cullin family.
    
 0.737
PIIN_05071
annotation not available
    
 0.711
PIIN_08688
Uncharacterized protein.
    
 0.707
PIIN_00522
TPR_REGION domain-containing protein.
    
 0.707
PIIN_09173
Probable ring-box protein 1.
    
 0.706
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.