STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_08955Uncharacterized protein. (450 aa)    
Predicted Functional Partners:
PIIN_02378
Probable YEF3-translation elongation factor eEF3.
   
 
 0.991
PIIN_00972
Probable mrna export factor elf1.
   
 
 0.838
PIIN_06694
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
   0.712
PIIN_01905
CHY-type domain-containing protein.
 
      0.643
PIIN_00578
tRNA (guanine(26)-N(2))-dimethyltransferase.
   
 
 0.627
PIIN_03122
Pyrroline-5-carboxylate reductase; Belongs to the pyrroline-5-carboxylate reductase family.
     
 0.622
PIIN_02250
Probable HEM13-coproporphyrinogen III oxidase.
   
  
 0.596
PIIN_09242
Probable iron inhibited ABC transporter 2.
   
   0.589
PIIN_02502
Probable ribosomal protein S28; Belongs to the universal ribosomal protein uS12 family.
    
 
 0.567
PIIN_00526
BHLH domain-containing protein.
   
 
 0.550
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.