STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_09002Uncharacterized protein. (345 aa)    
Predicted Functional Partners:
PIIN_09107
Probable YAH1-Ferredoxin of the mitochondrial matrix.
   
 0.672
PIIN_00060
Related to peroxisomal targeting signal receptor.
   
 0.647
PIIN_06964
Related to PEX5-peroxisomal targeting signal receptor.
   
 0.647
PIIN_09216
Probable Ubiquitin conjugating enzyme E2-16 kDa; Belongs to the ubiquitin-conjugating enzyme family.
   
  0.646
PIIN_01871
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
    
  0.636
PIIN_00343
Probable multifunctional beta-oxidation protein.
   
 0.633
PIIN_04681
Probable ubiquitin/ribosomal protein S27a fusion protein.
    
  0.633
PIIN_05020
CIA30 domain-containing protein.
    
  0.633
PIIN_08320
Related to PEX14-peroxisomal protein involved in protein import-peroxin.
    
  0.633
PIIN_08321
GRIP domain-containing protein.
    
  0.633
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.