STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_09003Related to proteophosphoglycan 5-Leishmania major strain Friedlin. (1317 aa)    
Predicted Functional Partners:
PIIN_06011
Uncharacterized protein.
   
 0.995
PIIN_06102
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.987
PIIN_01203
Uncharacterized protein.
   
 0.986
PIIN_03575
Nup54 domain-containing protein.
   
 0.986
PIIN_07234
Nuclear pore protein.
    
 0.985
PIIN_06723
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.983
PIIN_06131
Uncharacterized protein.
   
 0.982
PIIN_04914
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
 0.980
PIIN_00882
Related to mRNA export factor mex67.
    
 0.977
PIIN_05209
Related to NUP170-nuclear pore protein.
   
 0.975
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.