STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_09028Related to actin-interacting protein AIP3. (1028 aa)    
Predicted Functional Partners:
PIIN_04896
Tryptophan synthase.
     
 0.832
PIIN_00459
Related to cardiolipin synthase.
     
 0.798
PIIN_05496
Uncharacterized protein.
     
 0.798
PIIN_10397
Uncharacterized protein.
     
 0.798
PIIN_08157
Related to Cytokinesis protein sepA.
  
 
 
 0.745
PIIN_11848
annotation not available
  
 
 0.709
PIIN_08355
Related to Cytokinesis protein sepA.
    
 
 0.686
PIIN_00403
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
   
 
 0.660
PIIN_05439
Methyltransf_11 domain-containing protein.
    
 0.636
COQ3
Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family.
    
 0.636
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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