STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_09032Related to glutamyl-tRNA(Gln) amidotransferase subunit A. (312 aa)    
Predicted Functional Partners:
PIIN_04164
Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily.
 0.999
PIIN_02673
Related to DPS1-Aspartyl-tRNA synthetase, cytosolic.
  
 0.958
PIIN_02756
Related to aspartate--tRNA ligase, mitochondrial.
  
 0.938
PIIN_02930
Probable glutamine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.936
PIIN_04298
Related to SLM5-Asparaginyl-tRNA synthetase, mitochondrial.
  
 0.934
PIIN_04825
Probable DED81-asparaginyl-tRNA-synthetase.
  
 0.918
PIIN_00152
Related to glutamyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.915
PIIN_08737
Uncharacterized protein; Belongs to the cytochrome c oxidase subunit 6A family.
    
 0.894
PIIN_03937
Probable methylcrotonoyl-CoA carboxylase biotin carboxylase chain.
    
 0.867
PIIN_04476
Probable GUS1-Glutamyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.862
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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