STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_09218MFS domain-containing protein. (439 aa)    
Predicted Functional Partners:
PIIN_02226
Probable synaptobrevin (V-SNARE) homolog.
   
 
 0.677
PIIN_07550
Related to syntaxin binding protein 1; Belongs to the STXBP/unc-18/SEC1 family.
     
 0.651
PIIN_01309
ENTH domain-containing protein.
     
 0.636
PIIN_01300
Related to SEC9-protein transport protein.
     
 0.613
PIIN_03138
Related to SSO1-syntaxin-related protein.
     
 0.608
PIIN_03139
Related to SSO1-syntaxin-related protein.
     
 0.608
PIIN_07690
Related to RUD3-suppressor of uso1-1 transport defect.
     
 0.605
PIIN_02578
AP-3 complex subunit delta; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane.
     
 0.595
PIIN_01243
Ricin B-type lectin domain-containing protein.
     
 0.590
PIIN_01237
Ricin B-type lectin domain-containing protein.
     
 0.590
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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