STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_09299Phosphatidylinositol 3-kinase VPS34. (849 aa)    
Predicted Functional Partners:
PIIN_04972
Uncharacterized protein.
    
 0.999
PIIN_06072
Related to protein kinase homolog VPS15.
   
 0.999
PIIN_09282
APG6 domain-containing protein.
    
 0.974
PIIN_10599
Related to Beclin 1 (Coiled-coil myosin-like BCL2-interacting protein).
    
 0.974
PIIN_09817
DUF3543 domain-containing protein.
    
 0.951
PIIN_09972
Related to APG1-essential for autophagocytosis; Belongs to the protein kinase superfamily.
    
 0.951
PIIN_10748
Related to serine-threonine kinase.
    
 0.951
PIIN_02562
Probable VPS21-Rab5-like GTPase involved in vacuolar protein sorting.
    
 0.935
PIIN_08096
Probable GTP-binding protein ypt5.
    
 0.935
PIIN_04640
Uncharacterized protein.
    
 0.911
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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