STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_09606Uncharacterized protein. (717 aa)    
Predicted Functional Partners:
PIIN_06872
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
   
 
 0.703
PIIN_02117
Glyceraldehyde-3-phosphate dehydrogenase.
     
 0.702
PIIN_01040
Uncharacterized protein.
   
 
 0.686
PIIN_03035
annotation not available
    
  0.671
PIIN_03614
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
    
  0.670
PIIN_09361
Related to SIS2 protein (Cycle-specific gene control).
  
 
 0.663
PIIN_09692
Related to MIP1-DNA-directed DNA polymerase gamma catalytic subunit, mitochondrial.
    
 0.623
PIIN_06098
Related to thymidylate synthase.
  
 
 0.611
PIIN_01285
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
    
 0.592
PIIN_00784
Nucleoside diphosphate kinase.
     
 0.591
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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