STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_09629Related to Angio-associated migratory cell protein. (417 aa)    
Predicted Functional Partners:
PIIN_06728
Probable RPL10-60S large subunit ribosomal protein L10.
    
 
 0.987
PIIN_01888
Related to RRB1-involved in the regulation of ribosome biosynthesis.
   
  
 0.885
PIIN_03234
Related to FES1-Hsp70 nucleotide exchange factor.
    
 
 0.785
PIIN_05760
Related to MRPL16-mitochondrial ribosomal protein, large subunit; Belongs to the universal ribosomal protein uL16 family.
    
 
 0.785
PIIN_06065
Uncharacterized protein.
    
 
 0.785
PIIN_07583
Related to UTP13-U3 snoRNP protein.
  
   
0.748
PIIN_09052
Related to UTP18-Possible U3 snoRNP protein involved in maturation of pre-18S rRNA.
   
  
 0.679
PIIN_06382
Uncharacterized protein.
    
 0.648
PIIN_09151
G_PROTEIN_RECEP_F2_4 domain-containing protein.
    
 0.648
PIIN_04295
60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family.
   
  
 0.639
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.