STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_09704Uncharacterized protein. (701 aa)    
Predicted Functional Partners:
PIIN_02612
Related to WD-repeat protein crb3.
   
 0.676
PIIN_01509
Ipi1_N domain-containing protein.
    
 0.666
PIIN_11802
Related to pescadillo development protein.
   
 0.620
PIIN_06929
Related to alpha-actinin.
    
 0.602
PIIN_00824
Related to beta-1,3 exoglucanase.
    
 0.568
PIIN_01290
CLP1_P domain-containing protein.
    
  0.562
PIIN_01635
Related to LAS1-Protein involved in cell morphogenesis, cytoskeletal regulation and bud formation.
    
  0.558
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  0.554
PIIN_04212
Uncharacterized protein.
    
 0.542
PIIN_03199
Related to Sentrin-specific protease 1.
    
  0.537
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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