STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_09725Uncharacterized protein. (775 aa)    
Predicted Functional Partners:
PIIN_01654
Related to SAS10-involved in silencing.
   
   0.967
PIIN_05178
Related to ENP1-required for pre-rRNA processing and 40S ribosomal subunit synthesis.
   
 
 0.943
PIIN_05181
Probable NOP58-required for pre-18S rRNA processing.
   
   0.920
PIIN_04309
Probable RNA-binding protein.
   
 
 0.915
PIIN_05939
Related to UTP4-U3 snoRNP protein.
   
 
 0.908
PIIN_08475
Uncharacterized protein.
   
 
 0.889
PIIN_09343
annotation not available
   
 
 0.877
PIIN_01226
PUM-HD domain-containing protein.
   
  
 0.874
PIIN_00691
RNA helicase.
   
 
 0.873
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
   0.864
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
Server load: low (30%) [HD]