STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_09905Related to cgi-94 protein. (319 aa)    
Predicted Functional Partners:
PIIN_01163
Related to NOC4-ribosome biogenesis protein.
   
  0.999
PIIN_01654
Related to SAS10-involved in silencing.
   
 0.999
PIIN_02358
Related to EMG1-Protein required for ribosome biogenesis.
   
 0.999
PIIN_05180
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.999
PIIN_06111
DRIM domain-containing protein.
   
 0.999
PIIN_08416
Related to UTP7-U3 snoRNP protein.
   
 0.999
PIIN_01771
Probable 40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
   
  0.998
PIIN_01838
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
  0.998
PIIN_02398
Related to RRP5-processing of pre-ribosomal RNA.
   
 0.998
PIIN_08861
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
  0.998
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.