STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_09911UDP-glucose 6-dehydrogenase. (473 aa)    
Predicted Functional Partners:
PIIN_05177
Related to dTDP-glucose 4,6-dehydratase.
 
 0.992
PIIN_02104
Related to GAL10-UDP-glucose 4-epimerase.
  
 
 0.918
PIIN_01239
NAD(P)-bd_dom domain-containing protein.
  
 
 0.909
PIIN_07221
Formyl_trans_N domain-containing protein.
  
 
 0.890
PIIN_07218
Probable UDP-N-acetylglucosamine pyrophosphorylase.
     
 0.861
PIIN_08410
UTP--glucose-1-phosphate uridylyltransferase.
     
 0.854
PIIN_08245
Related to beta-fructofuranosidase-Phaffia rhodozyma; Belongs to the glycosyl hydrolase 32 family.
     
 0.851
PIIN_03131
Related to Translation initiation factor eIF-2B epsilon subunit.
  
 
 0.828
PIIN_06316
Galactose-1-phosphate uridylyltransferase; Belongs to the galactose-1-phosphate uridylyltransferase type 1 family.
    
 0.828
PIIN_06692
Related to GCD1-Translation initiation factor eIF2bgamma subunit.
  
 
 0.828
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.