STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_09912Uncharacterized protein. (930 aa)    
Predicted Functional Partners:
PIIN_06803
Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme.
   
 
 0.940
PIIN_02244
Smg4_UPF3 domain-containing protein.
   
 0.922
PIIN_06397
Related to Y14, exon junction complex.
    
 0.884
PIIN_02332
Probable NAM7-nonsense-mediated mRNA decay protein, ATP-dependent RNA helicase.
    
 0.842
PIIN_02331
Probable NAM7-nonsense-mediated mRNA decay protein, ATP-dependent RNA helicase.
    
 0.842
PIIN_07699
Related to regulator of nonsense transcripts 1.
    
 0.842
PIIN_01659
AAA_12 domain-containing protein.
    
 0.819
PIIN_02290
Related to NAM7-nonsense-mediated mRNA decay protein (RdRP).
    
 0.819
PIIN_07310
Uncharacterized protein.
    
 0.819
PIIN_07791
Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme.
   
 
 0.763
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.