STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_09936Related to importin subunit alpha-2-Schizosaccharomyces pombe. (507 aa)    
Predicted Functional Partners:
PIIN_00166
Probable karyopherin beta-1 subunit (Importin 95).
   
 0.956
PIIN_02568
Probable importin-alpha export receptor.
   
 0.948
PIIN_01047
Related to Pim1 protein (Poly(A)+ RNA transport protein 2), putative-Cryptococcus neoformans.
   
 
 0.889
PIIN_09003
Related to proteophosphoglycan 5-Leishmania major strain Friedlin.
   
 
 0.848
PIIN_03425
Nuclear cap-binding protein subunit 2.
    
 
 0.842
PIIN_03909
Related to 80 kDa nuclear cap binding protein.
   
 
 0.837
PIIN_03199
Related to Sentrin-specific protease 1.
    
 
 0.835
PIIN_04914
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 
 0.820
PIIN_07083
Probable YRB1-ran-specific GTPase-activating protein.
   
 
 0.762
PIIN_00747
Uncharacterized protein.
    
 
 0.741
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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