STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_09977Uncharacterized protein. (665 aa)    
Predicted Functional Partners:
PIIN_09978
Homeobox domain-containing protein.
    
 0.947
PIIN_09916
Homeobox domain-containing protein.
   
 
 0.763
PIIN_06801
Related to homeodomain transcription factor-Laccaria bicolor.
   
 0.761
PIIN_00796
MADS-box domain-containing protein.
   
 
 0.684
PIIN_02683
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.646
PIIN_03470
Related to histone deacetylase.
    
 0.646
PIIN_04004
Probable HOS2-putative histone deacetylase.
    
 0.646
PIIN_06656
Related to histone deacetylase.
    
 0.646
PIIN_02459
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
    
 
 0.624
PIIN_04338
Related to HOS3-Trichostatin A-insensitive homodimeric histone deacetylase (HDAC).
    
 0.534
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.