STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_10017Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (497 aa)    
Predicted Functional Partners:
PIIN_01351
Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.
  
 
 
0.992
PIIN_03183
Probable protein kinase CK2 alpha subunit; Belongs to the protein kinase superfamily.
   
 0.989
PIIN_00213
RRM domain-containing protein.
    
 0.983
PIIN_01213
U3 small nucleolar RNA-associated protein 22.
   
 0.980
PIIN_03596
Related to S. pombe beta-transducin.
   
 
 0.958
PIIN_07761
Probable IMP3-component of the U3 small nucleolar ribonucleoprotein.
   
   0.945
PIIN_00010
Probable IMP4-component of the U3 small nucleolar ribonucleoprotein.
   
   0.944
PIIN_01163
Related to NOC4-ribosome biogenesis protein.
    
   0.944
PIIN_04008
Related to UTP6-U3 snoRNP protein.
    
   0.944
PIIN_05180
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
   0.944
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.